What it does
SVDetect - Version : 0.8b
Comparison of clusters between two samples to get common or sample-specific SVs
This program is designed to compare filtered links between two anomalously mapped mate-pair/paired-end datasets and to identify common and sample-specific SVs (like the usual sample/reference design). Overlaps between coordinates of clusters and types of SVs are used as parameters of comparison.
Manual documentation available at the http://svdetect.sourceforge.net/Site/Manual.html
Contact Bruno Zeitouni (firstname.lastname@example.org) for any questions or concerns about the Galaxy implementation of SVDetect.