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.sv file
Converts filtered links to Circos/BED files format for graphical view of SVs

What it does

SVDetect - Version : 0.8b

Comparison of clusters between two samples to get common or sample-specific SVs

This program is designed to compare filtered links between two anomalously mapped mate-pair/paired-end datasets and to identify common and sample-specific SVs (like the usual sample/reference design). Overlaps between coordinates of clusters and types of SVs are used as parameters of comparison.

Manual documentation available at the http://svdetect.sourceforge.net/Site/Manual.html


Contact Bruno Zeitouni (svdetect@curie.fr) for any questions or concerns about the Galaxy implementation of SVDetect.